PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008244033.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 465aa    MW: 53224 Da    PI: 6.84
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008244033.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP121.78.6e-381703323133
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssa..sec...eaesssssas 83 
                      k+drhski T++g+RdRR+Rls+e+a++fF Lqd L fdk+skt+eWLl qa p+ik+l+g+         s+s+a  ++c   +      +a+
  XP_008244033.1 170 CKRDRHSKINTARGLRDRRMRLSLEVARKFFWLQDALHFDKASKTVEWLLIQATPEIKKLVGDckhmmsstkSTSPAtsESCeviS---GIDEAA 261
                     69*************************************************************99888776633333323333231...222222 PP

             TCP  84 nsssg.........................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                         +                          +ak+ +  +++ +++++++ l+k sr+kararare+ rek+r+ 
  XP_008244033.1 262 ----TntnihinidggndgddkliqsceiqPSAKERKVARRQLSRKTAFHPLSKASREKARARAREKAREKQRTH 332
                     ....023344667788999999999*99974444444444555555557**********************9976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136929.99171229IPR017887Transcription factor TCP subgroup
PfamPF036343.3E-40171331IPR005333Transcription factor, TCP
PROSITE profilePS5137010.291311328IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MFPSNSNNNL NNTGNELPVS YPHVDQSFFH SRPFLHEITT LNPNSLHPNL NSKQEEEQRQ  60
QEGPHHHPLS FFYFPSPLED DDVLLFQQHH HYDHQHDHVH DMPLHDSQQA PPLTTMREAV  120
AANNTLADDH RQTTTTSTTL NIKMVDWDSN KNHGEMMNMD QPQIPRRRSC KRDRHSKINT  180
ARGLRDRRMR LSLEVARKFF WLQDALHFDK ASKTVEWLLI QATPEIKKLV GDCKHMMSST  240
KSTSPATSES CEVISGIDEA ATNTNIHINI DGGNDGDDKL IQSCEIQPSA KERKVARRQL  300
SRKTAFHPLS KASREKARAR AREKAREKQR THQRVVDVDD QSKKQRGDQE NLSRLGSWSP  360
FETGEESAGT QSHNNNNISI NSLEGLVHHE IEEPMSSCQV GDHPDLVVDH GTTHDPLVIM  420
GKWSPPSIFS SLQQNIGISQ EHHQFADIQF FGKPWEVYNN PHNLF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008244033.10.0PREDICTED: transcription factor TCP18
RefseqXP_008244034.10.0PREDICTED: transcription factor TCP18
RefseqXP_008244035.10.0PREDICTED: transcription factor TCP18
RefseqXP_008244036.10.0PREDICTED: transcription factor TCP18
TrEMBLM5WCE80.0M5WCE8_PRUPE; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65642851
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.21e-22TCP family protein